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The Orange Carotenoid Protein: a blue-green light photoactive protein
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance … Our User Programs entail a competitive, proposal-based process including …
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Virus species names have been standardized; virus names remain unchanged
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … the team to identify the direct binding sites of many transcription factors to better understand how nutrients are …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science … set, the same 15 core genes — 14 encoding energy-production proteins plus one ribosomal protein gene — were present in …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … The Metagenome Program focuses on the high-throughput sequencing of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that is, a … research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Experimental factors affecting PCR-based estimates of microbial species richness and evenness
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Divergence among Genes Encoding the Elongation Factor Tu of Yersinia Species▿
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Thermoacidophilic proteins for biofuel production
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