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Building Sphagnum Genomic Resources
… Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of … by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of … 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … genetic sequences (already known as CRISPR) that came up in her team’s metagenomic  samples . While Banfield … to annotate them in plants other than maize including black cottonwood, rice,  Arabidopsis ,  Mimulus and Amborella (in …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … more clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint … most advanced integrative genome science capabilities in support of the DOE’s research mission.     Director's …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … interactions to untangle. Fungi work in cooperation to support a forest, and species vary across Earth’s … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … genomics and metagenomics of the microbiology-focused groups at the Joint Genome Institute, it is fantastic that …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … Researchers at CABBI and elsewhere are following up on these discoveries to develop new varieties of … This work was supported by the Energy Biosciences Institute and the DOE …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … more than 100 algal genomes, compare them, and visualize supporting experimental data. The Impact Algae are important … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … by electricity anytime soon,” Stacey said when we caught up with him recently. “So, there’s going to be a need for … biofuels and that’s a good niche market for soybean.”  Upon its initial release in 2009, the soybean genome …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … fruit, yet sweet are its genetic secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … there were pieces from multiple boxes, including some duplicates, to sort through in order to form a single … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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