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How Microbes Can Protect Plants in Drier Straits
New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to drought. …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types …
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Partners
The JGI leverages its existing partnerships and develops others … with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will …
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Cultivating Symbiotic Antarctic Microbes
The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and … membrane lipids, suggesting they rely on  Hrr. lacusprofundii for them. One of the most distinctive features of the …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In … snow drain into such bodies of water before heading out to bays and oceans. While river microbes are critical to … under a subcontract from the River Corridor Science Focus Area (RC-SFA) at Pacific Northwest National Laboratory …
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JGI@25: The Little Alga That Could
… evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with … JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and … also a faculty scientist in the Berkeley Lab Biosciences Area. Merchant’s fascination with Chlamy began in her early …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … researchers have been able to study both sides of this interaction up close, using RNA sequencing to understand … them to understand gene expression within circular capture areas roughly 55-microns in diameter — about the width of a …
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JGI Welcomes New UEC Members
… who has been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. … of Massachusetts-Amherst, who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, …
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JGI Earth Month: Wetlands Work in #TenHundredWords
DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems … work on which she is expanding with her study of microbes in California’s manmade water transport canals. …
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