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Natural Prodcast Episode 11: Marnix Medema
… that you do, then it’s very easy to think that, OK, I find 25 gene clusters, there must be 25 new compounds. Or everything that has similarity to a gene … that I was exchanging with people. So I think I wrote 3,000 emails in the course of one and a half year while …
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Natural Prodcast Episode 5: Brad Moore
… because I was always swimming or surfing. And you know, 25 hours a day we’re at the beach practically. It was just – … has been a lot of fun for us in recent years. Started in 2015, when two things happened. One, a new graduate student … domoic acid, [and] caused amnesic shelfish poisoning. Over 100 million dollars was lost just in the Dungeness crab …
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Metagenome Program
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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … just did a low-resolution shotgun pass where we sequenced 500 runs. And then we used those to find gene clusters in … https://sim.confex.com/sim/np2023/meetingapp.cgi/Paper/46926 Jen Wurm:  …
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Natural Prodcast Episode 23: Aaron Puri
… 2021 Aug 20;16(8):1332-1338. doi: 10.1021/acschembio.1c00329. …
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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Natural Prodcast Episode 2: The Primer, Part 2
… who was working on these things in the very early 1900s.  DAN: And so he has drawn what he called … from 1940 to 2000. As you can see, from the 1940s, into the 50s into the 60s, there was a huge growth – a huge explosion …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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