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Partners
… has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … access to datasets, workflows, and tools to seamlessly expand data functionality. Close partnerships with other user …
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Programs & Platform Leads
… drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, … infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …
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Triggering Morel Fruiting
DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired from … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated carbon into …
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Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications … diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the world have … roles in both the carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause …
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Building Sphagnum Genomic Resources
… developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … by David Weston of Oak Ridge National Laboratory make the case for  sphagnum as “an unparalleled model system for …
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Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon
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Aerobic bacteria and archaea tend to have larger and more versatile genomes
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A Complex Confection Decoded: Sugarcane Reference Genome
… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for … protect other crops facing similar pathogens. Summary Many plants, sugarcane included, are polyploid and have multiple … image. In contrast, assembling the sugarcane genome was more challenging and took more than a decade because there …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Thus, having reference  Chaetoceros genomes would provide more information on these ecologically relevant species. … reviewers allowed me to be better prepared and to avoid making the same mistakes,” he said. “Although in my specific case the projects are different for the two proposals, I can …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was … Science Program, to use microbiome science to help make plants more resilient to drought. …
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Data Policy & Support
… … Read more about our data management practices and the resources …
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