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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … will help solve energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths … al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . Science. 2006 Sep …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically … was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and he worked …
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Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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A Molecular Study of Microbe Transfer between Distant Environments
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Genome sequencing of Porostereum spadiceum to study the degradation of levofloxacin
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Suillus: an emerging model for the study of ectomycorrhizal ecology and evolution
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Engineered Biosynthesis and Anticancer Studies of Ring-Expanded Antimycin-Type Depsipeptides
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Viromics approaches for the study of viral diversity and ecology in microbiomes
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Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity … The JGI is inviting researchers using the U.S. Culture Collection Network … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. …
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