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Suillus: an emerging model for the study of ectomycorrhizal ecology and evolution
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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Metabolomics Program
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First Monoploid Reference Sequence of Sugarcane
… States, Brazil produces a quarter of the world’s ethanol production from sugarcane. Improving sugarcane breeding … juice that can be further purified to produce alternative biofuels. A C4 plant like sorghum and maize, sugarcane can … sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more than 80 percent found to be …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses.
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Genome-scale model development and genomic sequencing of the oleaginous clade Lipomyces
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The diatom Fragilariopsis cylindrus: A model alga to understand cold‐adapted life
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EcoBOT: an AI/ML enabled automated phenotyping capability for model plants
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Corymbia Genome Expands Terpene Synthesis Knowledge
… in industrial materials, pharmaceutical products, and as biofuel precursors. Collectively, hundreds of terpene … is increasingly farmed in other countries for essential oil production. The recent assembly of two Corymbia citriodora … eucalypt lineages. Since terpenes serve as feedstocks for biofuel production, a greater understanding of terpene …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … study subject that could lead to more sustainable energy production.  However, less than 10% of the microbes found in … that ability into industry, specifically to generate biofuels,” Hess said.  (Only 90 of those genes were actually …
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ORT: A workflow linking genome-scale metabolic models with reactive transport codes.
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