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Metagenome-assembled genomes from microbiomes fermenting dairy coproducts.
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Finding the Fermenters
… researchers recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant … As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this …
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Dispatches From JGI Interns
… real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into …
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Bacterial Diversity in the Cecum of the World’s Largest Living Rodent (Hydrochoerus hydrochaeris)
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Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to include a dedicated section for … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 …
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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research … biofuels and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of Wu, … collection and on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team …
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … The ancestors are a bit hard to identify and there’s a small possibility that something could be missing from the …
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Environmental predictors of electroactive bacterioplankton in small boreal lakes
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