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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… EcoFAB. These small plastic growth chambers let researchers around the world compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos Community College to see …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado State University in … He’s part of a JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the … think like it’s, it’s this unique time where the preceding 300 years, that change was not occurring at that pace, …
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to include a dedicated section for … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and … at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where … Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & Technology- Agriculture” 2021-  Weill …
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Improving the Cacao Genome and Phytozome
… a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to …
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Institutional User Agreements
… and delays on the work. The transfer of a proposal from one commercial institution to a new commercial … Before work can begin on proposals submitted by researchers from another DOE National Laboratory, a JGI-BDLUA ,  BDLUA … completion of work on all approved proposals within 36 months from the approved start date. Additional time …
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Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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