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New and Improved: Eucalyptus Reference is Now Accessible
… for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances … it separately represents the sets of chromosomes inherited from each parent. It also has 700-fold greater contiguity, …
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … secondary metabolites are produced by groups of genes known as biosynthetic gene clusters (BGCs.) As … it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and …
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Open Education, Open Minds
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … of the bacteria potentially holds the key to discovering new antiviral medicines and treatments for infectious … of ActinoBase,  a public platform built on the knowledge of researchers studying actinomycetes and the focus of a  …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in … where it was found. The study was featured on the  New York Times 2022 List of Firsts as well as other year-end … thought. Instead, it turns out this fern has been co-opting genes from bacteria. Schmutz was also involved in  a …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … the team unprecedented resolution to study the network of genes that contribute to the metabolisms that individual …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… of bacteria with diverse metabolic activities. Found in marine and terrestrial environments, actinobacteria play … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA has been … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … working in 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by … found that anaerobic fungi from herbivore poop might be a new source of novel compounds to help bolster the …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using …
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JGI Announces 2025 New Investigator Portfolio
… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, … who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science … on rhizosphere microbiomes, and the metabolic pathways of algae. They will harness JGI capabilities such as …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly … nutrient cycling and carbon storage. For example, the marine algae  Emiliania huxleyi, a microeukaryote, forms … gene based surveys allow researchers to use signature genes, rather than an entire reference genome, to sift for …
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