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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Comparative Genomics of Saccharomyces cerevisiae Natural Isolates for Bioenergy Production
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … users and their science including technical capabilities offered, proposal review procedures and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community, …
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of …
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Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus
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High‐Density Single Nucleotide Polymorphism Linkage Maps of Lowland Switchgrass using Genotyping‐by‐Sequencing
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s … this and deal with it is through these antibiotic- or antifungal-producing bacteria that live on the exoskeleton of …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … conducted RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic …
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User Support Analysis Group
User Support Analysis group provides computational analysis for new technology development and JGI user science … with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …
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Rapid whole-genome mutational profiling using next-generation sequencing technologies
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User Science
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