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Simon Roux
… the development of novel computational tools to identify virus sequences, the design of new experimental … For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and virus … and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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Mission
… scientific approaches to these challenges.     Our homepage video includes external footage from:  University of … to publish the sequence analysis of the target chromosomes 5, 16, and 19, in the journal Nature . Following this … for JGI resources and are engaged in active projects—each year. In addition, several thousand data users worldwide …
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Tanja Woyke
… and assumed the Deputy Director of User Program position in 2021. In addition to her JGI appointment, she also holds an … of California, Merced's School of Natural Sciences since 2015. Prospective users with specific questions regarding their … and Bioinformatics at Virginia State University (2021-current). Editorial Board Member for ISME J (Senior …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
Switchgrass is a native, shrubby grass that can grow year-over-year on marginal soil and with few resources. … Plants . Since 2007, the JGI has been working on identifying switchgrass genes related to biomass production, … crop productivity across 1,100 miles and eight states. In 2021, using switchgrass samples from these gardens, a team …
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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Back in the Lab: the 2023 Summer Intern Experience
… the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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Scaling Up Existing Skill Sets
… shared their experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: … even know existed before. Name: Deepika Gunasekaran Class Year: 2nd year graduate student in Quantitative and Systems …
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Webinars on Offerings & Capabilities
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Progress Reports: 2002–2020
Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress Report … FY17 Progress Report … FY16 Progress Report … FY15 Progress Report … FY14 Progress Report … FY13 Progress …
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Plant-Microbial Interactions Group
… system. We seek to expand beyond this model system by identifying phages and characterizing this multipartite phenomenon … expression patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z … 10.1038/s42003-021-02477-4 10.1038/s41477-021-00915-z 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 …
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