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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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How Filamentous Fungi Sense Food
… decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and … break down the wide array of simple and complex components present in plant biomass. This is of interest for … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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Doubling Down on Known Protein Families
… novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring … repository of groundbreaking insights, significantly expanding the horizons of potential functions across various … sequences evaded classification. Researchers also tried to hone in on the function of the genes via 3D modeling, and …
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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User Programs
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Sequencing the fungal tree of life
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Genome analysis and description of Tunturibacter gen. nov. expands the diversity of Terriglobia in tundra soils
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JGI Portals
… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Introducing New Members of the JGI User Executive Committee
… to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome … collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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How to Submit Sequencing Samples
… at the JGI. The quality of the starting material is one of the greatest predictors of a successful sequencing … completed. You can view the status of your projects at any time by accessing various reports on the JGI Portal . Use …
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