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Industry Engagement Program
… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz et al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… and Environmental Change (SPRUCE) project Melanie LeGro (2016 graduate intern): Currently serves as the graduate … the advancement of women in STEM. Lisette Manriquez (2016 undergraduate intern): Applying to UCSF’s graduate … genomics internship with Igor Grigoriev. Portia Mira (2016 graduate intern): Just started postdoc at UCLA and also …
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Improving the Cacao Genome and Phytozome
… will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … noted that even prior to the sequence being published in  Nature , immediate progress had already been made … ASR in this JGIota, a Genome Insider podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis …
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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JGI Announces 2026 New Investigator Portfolio
… and Environmental Research program missions.  Below find a list of researchers whose proposals were accepted for 2026. … including metagenomics, metatranscriptomics and genome assembly to investigate microbial and plant …
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Igor Grigoriev
… of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched …
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JGI Early Career Researchers Featured in mSystems Special Issue
… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … The technique was applied to a recent Nature Communications paper, uncovering giant virus sequences in soil for the … a member of Eloe-Fadrosh’s Environmental Genomics group, makes a pitch for readers to get involved in the developing …
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When “The Blob” Made It Hotter Under the Water
… go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … events such as The Blob is difficult, but critical. By 2016, the microbial populations had begun to recover from …
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Comparative Genomics of Saccharomyces cerevisiae Natural Isolates for Bioenergy Production
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Workforce Development & Education Outreach
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