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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … or terrestrial biodiversity hotspots that we have on Earth, most of those occur in nations that have very poor …
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Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
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Lytic archaeal viruses infect abundant primary producers in Earth’s crust
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Frederik Schulz
… machine learning to find novel functions that may impact microbiome structure and biogeochemical cycles. He provides … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded … . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have … help solve energy and environmental challenges. The 1KFG project represents affiliations at over 180 organizations in … involvement with the 1KFG project. Over 1,000 species have been nominated for the project by more than 100 …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … Fungal Genomes project can enable studies of plant root microbiome and other microbiomes by providing reference …
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You Can Move, But You Can’t Hide
… viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  … software was created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … analytical standards to accurately measure environmental microbiome activity levels.This functional assay lets us …
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Microbiome Engineering: Synthetic Biology of Plant-Associated Microbiomes in Sustainable Agriculture
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
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