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… plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated …

… Tracing gene regulatory networks in the model fungus  Neurospora … used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous fungus  … the activity, expression and regulation of protein-coding genes. This first paper integrating multi-omics data from …

… America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … my perspective, JGI has a large database of biosynthetic gene clusters and biosynthetic gene cluster fragments, and … because they are selected against because of their lack of function. So knowing about the full sweep of chemistry which …

… sequence can lead to changes in protein structures and functions, but the DNA bases themselves can also be … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in … – similar to the MAC clusters for 6mA), rather than in genes, which suggests that 5mC may play a role in genome …

… publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference … Center), HudsonAlpha and the JGI also identified a gene related to seed dispersal in wild populations for the first time. A 2020 Nature Genetics paper …

… and the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, … of the results were unexpected. For example, lichenologists generally anticipated that in this symbiosis going back … the door for more incisive investigations into how lichens function. One of their abilities that’s  now getting more …