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Publication Policy
… assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome Portal Navigate to the JGI Genome Portal . Click …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …
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A Community Resource for Secondary Metabolite Researchers
… over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. …
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JGI announces final round of 2022 Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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Better Genome Editing for Bioenergy
… included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … a team of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s … work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … Achievement Award (2022) ASM’s USFCC/J. Roger Porter Award (2018) Honorary Doctorate from the Aristotle University of …
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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … in developmental and disease processes in the human genome. In addition to his appointment at the DOE Joint …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … possible to do something that the field refers to as “genome mining”. So, if you can sequence the DNA and actually … all of the genes. So that’s one of the real utilities for genome mining is you can identify biosynthetic gene clusters …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … the first legume species with a published complete draft genome sequence. At the time, the vital global source of … soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately spurred further research and …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … vast landscape of gene regulatory sequences in the human genome. Understanding how variation in regulatory sequences …
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Emiley Eloe-Fadrosh
… training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of … 2003 Board Member, Genomic Standards Consortium (2018-current) Steering Committee Member, International … Adjunct Graduate Faculty Member, Duke University (2018-2020) Section Head, Microbial Evolution & Genomics, …
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