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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … increasingly as the climate warms. However, these are complicated interactions to untangle. Fungi work in cooperation to … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the …
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Better Genome Editing for Bioenergy
… can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, but these …
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Thousands of small, novel genes predicted in global phage genomes
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Building Sphagnum Genomic Resources
… carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact on global carbon … matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years … Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … guide RNA library generation and development and its applications. “I moved to UC Davis in 2014,” recalled Philipp … the full library.   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Microbiome Data Science Team
… creating new opportunities for breakthrough discoveries and catalyzing a major transition of biology into data science.  … the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… the JGI has a Partnerships Development Team which helps catalyze collaborations with companies (and other … to contact? A:  Contacts are listed on the proposal call page. Feel free to  reach out to any of them with questions. … to their resources. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley …
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Single Cell Research Group
Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … effort in the Woyke lab is therefore focused on the application of  function-driven single-cell genomics . Here, …
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Complete genome sequence of Arcobacter nitrofigilis type strain (CIT)
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