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Forming Scientific Connections and Building Community
Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great meeting …
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Nikos Kyrpides
… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant … Tract ( MetaHIT ); Community Cyber-infrastructure for Advanced Marine Microbial Ecology Research and Analysis ( …
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Building on Experience, With a Twist?
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … from environmental samples around the world, expanding the known diversity of bacteria and archaea by 44%, is now … MAGs. Modeling A New Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional …
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Microbial secondary metabolites: advancements to accelerate discovery towards application
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Overview of the MOSAiC expedition: Ecosystem
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A sweet spot in marine ecosystems
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern … bacteria. The insertion of transposable elements — also known as “jumping genes” because they can change position … S.C.; grant 41571049 to Y. Wu); China Agricultural Research Systems (grant CARS-05 to S.C.); the Key R&D Program of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National … the global research community with access to the most advanced integrative genome science capabilities in support …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… work to create FAIR datasets to maximize returns on these advances. Over the last two decades, Stable Isotope Probing … and participation — is especially important in microbial ecosystems. These communities harbor tens of thousands of … hundreds of stable isotope probing genome-resolved metagenomes and will be implementing new tools in KBase to …
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