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JGI@25: Following Fungi that Pry Apart Plant Polymers
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David Goodstein
… in Physics, Cornell University, NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference … structural mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant Gene Atlas: an updateable transcriptome …
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Supercharging SIP in the Fungal Hyphosphere
… the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… think like it’s, it’s this unique time where the preceding 300 years, that change was not occurring at that pace, right. And then, hopefully, 3-400 years down the road we’ll have a steady state where we …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon compound that plays an essential role. But other … yuccas is that there are closely related species that use C3 and CAM. ALISON: But plants don’t need to be restricted …
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JGI Early Career Researchers Featured in mSystems Special Issue
… mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years …
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New Research Sheds Light on Diversity in the Deep Sea
… to the study as well as  genome analysis, providing authors a more complete picture of the taxonomic composition … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 and DBI-2047598 …
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Making a Lichen Together
… from each other. A possible explanation, according to the authors, lies in their finding that each lichen partner can … by a DOE-Biological Environmental Research grant No FWP 61327 to FRC and PL (for RNAseq). The work at the Joint Genome … DOE Office of Science under Contract No. DE-AC02-05CH11231. The work of MP, DL and SSM was supported by the U.S. DOE …
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Enlarging Windows into Understanding Gene Functions
… 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and Juna Lee developed two approaches … transcription factor of interest. Nature Methods paper coauthor Lee did the initial development of a streamlined …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… this enzyme family,” said Sang-Woo Han, one of the co-first authors of this work.  Han is an Assistant Professor at … fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified across …
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Picking Up Threads of Cotton Genomics
All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in size, and are hybrids … assembled the genomes of these five cotton lineages. Senior authors of the  paper published April 20, 2020 in  Nature … cattle feed crop,” noted David Stelly, another study co-author at Texas A&M University. “This report establishes new …
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