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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single … Exploring the fascinating world of giant viruses, which challenge our understanding of viral complexity …
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JGI Mural
… and energy genomics. Click on the images below to learn about the science depicted. The two-story JGI mural was … 25th anniversary and done by Berkeley-based artist Nigel Sussman. It was dedicated at the 2022 JGI Annual Meeting. …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Leo Baumgart
… sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. … cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through … Lax, Carlos, Stephen J. Mondo, José F. Martínez, Anna Muszewska, Leo A. Baumgart, José A. Pérez-Ruiz, Pablo …
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Integrating Experimentation with Data
… $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute … featured insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking … of Energy (DOE) Office of Science national scientific user facilities dedicated to advancing research in bioenergy …
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FICUS-NERSC/KBASE
… Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … for proposals in biological data science as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather proposals are submitted in …
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Jeremy Schmutz
… years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant … cellulosic feedstocks. He provides scientific project management for the reference eukaryotic genomes produced by … Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …
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Metabolomics Program
… are crucial for advancing the bioeconomy, environmental sustainability, and improving bioenergy crops. … The Metabolomics Program is focused on understanding the critical roles of metabolites in … as they relate to DOE missions in the bioeconomy, sustainability, and environmental research. This program …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and … of multiple Department of Energy Office of Science National User Facilities into their research. In recognition of the … The ranked proposal list, along with a recommendation from management at JGI and the other participating facilities, is …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics … to the Facilities Integrating Collaborations for User Science (FICUS) Call Karolina Michalska , Advanced …
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Kjiersten Fagnan
… Research Division. As a postdoc, her research focused on stable and accurate computational methods for … Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing … she presented work related to distributed data and workflow management.  …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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