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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, aimed to streamline a process … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …
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Genome organization of the vg1 and nodal3 gene clusters in the allotetraploid frog Xenopus laevis
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Statement on the Use of Genomics Data
… of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to … and reinforced by the  Fort Lauderdale Agreement (2003), the JGI recognized the need to engage the community … to be moved to private status. This will remove records from search indexes and BLAST databases until such time that …
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Nandita Nath
… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without amplification. …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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How To Use Our Systems
… and its curation in our core processes. This allows us to provide diverse scientific communities with large amounts … high-quality data and metadata, and connect our data to the broader biological data ecosystem. Our community of … tens of thousands of researchers. The JGI is always seeking to better understand our broader community of users. Each …
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. … that increase participation in higher education and access to fulfilling science careers, JGI hosted five students from …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the Industrial Biotechnology private … Secondary Metabolites Program head as well as our JGI Director. Click to learn more about the program's areas of focus, …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the … journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …
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The Busy World of Deep Sea Eruptions
… thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among … working in 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by …
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Georg Rath
… leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the … of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, … High Field MRI Centre in Vienna, where he first stumbled from software development into building productive …
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