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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements …
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling … and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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Back in the Lab: the 2023 Summer Intern Experience
This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 …
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Cracking the Secrets of the Diatom’s Shell
Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this … research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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JGIota: Looking Back at Sequencing for Soybeans
The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping … sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …
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