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ARBitrator: a software pipeline for on-demand retrieval of auto-curated nifH sequences from GenBank
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Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons
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MjCyc: Rediscovering the pathway-genome landscape of the first sequenced archaeon, Methanocaldococcus (Methanococcus) jannaschii
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral sequences, which would suggest the virus had been infecting …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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The Genome Portal of the Department of Energy Joint Genome Institute
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … then used a series of random insertions of a foreign DNA sequence to generate a huge pool of mutants, each containing … died and others grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… the researchers will receive a FedEx package with the sequenced, quality controlled population representing the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …
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Eelgrass Proves to Be Much Younger Than We Thought
… form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… water mold, genetically related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop …
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