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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play … expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture experiments showed …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … of Brachypodium distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The best part of …
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The fungus that made itself at home
… plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint … inside homes, and in an environment that offers limited interactions with wild relatives. …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … building high performance user interfaces and backend data systems. Trying to maintain v12’s codebase and legacy data …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … bioenergy feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the … in Igor Grigoriev’s team at the JGI led the multi-omics analysis effort for a more complete picture. The team …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … with Marnix on putting that stuff together. It’s been kind of a theme, I think, in the last couple of conversations … And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to …
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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … sure our computational workload can leverage future HPC systems – our data and compute challenges aren’t getting any …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform … the 500-gigabase cap and that you don’t request outside of the sample range that’s listed. Q: What are the pros and …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … to their economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 The sequence and analysis of duplication-rich human chromosome 16   …
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Annual Genomics of Energy & Environment Meeting
… the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse disciplines to highlight how they … – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the JGI …
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