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…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile … move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and …

… I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise … so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … and to do research to get a better understanding of that data. ALISON: Awesome. So tell me why should I even care …

… communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with … under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of …

… (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and … in 2009. Gros’ research focuses on marine mangrove systems, and he was looking for sulfur-oxidizing symbionts …

… are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and … consequences on the entire food web, and therefore ecosystem services that we all depend on,” said Mock. Mock and … and stark the biogeographic boundary is between them. The data is somewhat beautiful in that regard,” said Andy Allen, …

… JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …

… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … came up with this new method, Session mentioned that the analysis for determining the evolutionary history of … small possibility that something could be missing from the analysis (due to extinction or you didn’t sample it). But …

… genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how … genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 mycorrhizal species include 29 … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …

… on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 … tropics of the Asia-Australia region. Overall, pangenome analysis showed significantly more genetic diversity in …

… as a first-year graduate student in the Quantitative Systems Biology (QSB) Group under the School of Natural … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that … of the opportunity. “I’m getting a picture of the amount of data that’s going to be generated at academic level in a few …