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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Functional Characterization of Two Class II Diterpene Synthases Indicates Additional Specialized Diterpenoid Pathways in Maize (Zea mays)
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … that it was a nice example of “big-data” mining to gain a deeper understanding of the data and enhancing the value by …
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Methane Makers in Yosemite’s Lakes
Meet researchers who have hiked, rafted and met local wildlife (a … the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, …
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Ian Blaby
National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … algae, archaea and bacteria with a view to developing a deeper understanding of sequence-based gene function. … B.Sc. (HONS) – University of …
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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … challenges. Viruses are everywhere — in soil, the sea and, of course, the cells of other organisms. As they …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any … of a course or internship, and before ever publishing a research article. Speakers will highlight opportunities for …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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