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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… RNA sequencing to understand gene expression: one of the first cross-kingdom spatially-resolved transcriptomics … survive in those environments,”  Karen Serrano said. She is first author of this paper and a graduate researcher at the …
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Yasuo Yoshikuni
… unique sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the …
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Cataloging the Microbes that Manage the Health of River Systems
… to standardize the process. They noted this may be the first publicly available, river-focused microbial resource … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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The Expanding Universe of Methane Metabolisms in Archaea
… methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” Borrel … have relied on only one korarchaeotal representative,” said first author McKay. “Now we’re adding two more: one ( …
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JGI on the 2021 Highly Cited Researchers List
… research team that combined field data with a reference switchgrass genome to associate climate …
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A One-Stop Shop for Analyzing Algal Genomes
… algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many sequenced by the JGI — so researchers can easily explore the …
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Gut Fungi: Unexpected Source of Novel Chemicals
… of four anaerobic fungal species has revealed, for the first time, that this group is unexpectedly powerful: they … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint … products. In the lab, O’Malley and her team — notably, first author Candice Swift — verified that the fungi …
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iPHoP: A Matchmaker for Phages and their Hosts
… helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program …
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Refining the Process of Identifying Algae Biotechnology Candidates
… Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in … expertise at the National Labs to screen, characterize, sequence and then analyze the genomes and multi-omics … varying temperature conditions. The Scenedesmus genome was sequenced and assembled at the JGI. Sara Calhoun in Igor …
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