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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), … of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and search through the more than 2 million viral sequences …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community … that might be quietly improving the soil. Penn State researchers Mary Ann Bruns and Terry Bell are digging in to …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, … on lakewater samples — so this episode is a look at how researchers get these specialized snapshots of a freshwater …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of … (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent … wildfire.  Eight of the approved proposals are led by researchers, including Nelson and Roth, who have not been a …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing … and analyzed the genome of an alga that thrives in saltwater (halotolerant) and produces the most biomass to … for controlling the lipid content of biofuels sourced from algae. The collaborative approach highlights how the …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: Hevea … latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating … for 2023. Proposals are accepted year-round; the next deadline is Jan. 29, 2024.  …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic … for 2022. Proposals are accepted year-round; the next deadline is July 31. You can learn more about our Community …
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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome … Meeting! The JGI convenes this annual gathering of leaders from diverse disciplines to highlight how they are … challenges.  The invited talks emphasize how the research infrastructure – DNA sequencing, synthesis, …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
To understand how organisms adapt to extreme environments, Marike Palmer and Brian Hedlund …
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