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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants … of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … Change’ (SPP 2237), and grant 410739858 in the frame of the project CharMod to K.v.S., as well as RE 1697/16-1 (CharMod) …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching workshops …
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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can … and even how quickly. But there's a catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis …
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Three Join the JGI User Executive Committee
Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest … and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight other JGI users … is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial …
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efam: an expanded, metaproteome-supported HMM profile database of viral protein families.
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An HMM approach expands the landscape of sesquiterpene cyclases across the kingdom Fungi
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of … the difficult early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop … a combination of really cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy … across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and … plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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A Step Toward Controlling Soybean Rust
The United States  is the world’s leading soybean producer , and soybeans … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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