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Exploring Phages at JGI
… As a first-generation college student, I never really entertained the possibility of working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate with …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate details of life’s genetic blueprint has … community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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JGIota: The Algae Nicknamed ‘Chlamy’
… This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii – that’s … why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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IMG/VR
… to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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