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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. … The topics students worked on ranged far and wide — from implementing new data visualization tools, to using …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing environments better? We could unlock … and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …
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IMG/VR
… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and …
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JGI@25: Studying Sorghum’s Survival Skills
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. Sorghum stands out as a candidate feedstock for biofuels thanks to its drought and flood hardiness. … Tolerance in Sorghum (EPICON) begins. Peggy Lemaux (UC Berkeley) and her team studied sorghum plants in drought …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be … researchers Mary Ann Bruns and Terry Bell are digging in to understand how. …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from academia, industry, and government organizations for …
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JGIota: Looking Back at Sequencing for Soybeans
With a full genome sequence, researchers have been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …
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Creating an Energy Market for Miscanthus
… a bioenergy plant? Meet Miscanthus , an attractive addition to your garden and a potential fuel for the future. But, to be competitive in the market, both energy policy and … Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, …
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Microbial Genomics & Metagenomics (MGM) Workshop
… mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & … data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables … data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great … at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: guayule.  …
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