Results

Assemblathon 1: A competitive assessment of de novo short read assembly methods
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A SNP resource for Douglas-fir: de novotranscriptome assembly and SNP detection and validation
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De novo Nanopore read quality improvement using deep learning
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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At the Forefront of Terrestrial Virus Research
… Gary Trubl is finishing his PhD in Microbiology at The Ohio State University, co-advised by Drs. Virginia … Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research opportunities at DOE laboratories.   …
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Georg Rath
… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … today. I didn’t know anything about Principal Component Analysis (PCAs) when I first started, and overall found … a strong role in my career interests post-Ph.D. in the sciences. “ Ul-Hasan was one of two UC Merced graduate …
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen
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