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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this … capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … aims to help overcome common user bottlenecks in access, analysis and sharing of JGI-generated data. She is also …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that … bacteria, archaea and fungi. We thought this kind of analysis would provide a framework for the evolution of this … Facility located at Berkeley Lab. In addition to providing metagenome mining for computational analysis of the AT …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley … of topics related to structural biology, single cell and systems biology, omics, and big data science, machine … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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The endosymbiotic box of protective tricks
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Comparative Transcriptomics between Synechococcus PCC 7942 and Synechocystis PCC 6803 Provide Insights into Mechanisms of Stress Acclimation
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Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence
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Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the … to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ motivations, the …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy … because they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related decomposition … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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