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Genomic prediction of switchgrass winter survivorship across diverse lowland populations
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Insights into convergent evolution of cosexuality in liverworts from the Marchantia quadrata genome
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Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt … Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in … resist. The battle waged below the Earth’s surface is reconstructed by combining a study of microbial communities …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in … one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … with renowned scientists who were involved in the Human Genome Project, or computational biologists who were …
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How Filamentous Fungi Sense Food
… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … fungus  Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the …
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