Results

Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and … participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking at … the data and work with the data. Q: How would you include a reference or citation in a proposal? A: If you’re presenting …
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds
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Multilab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass
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Engineering Pseudomonas putida for efficient aromatic conversion to bioproduct using high throughput screening in a bioreactor
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Gene Coexpression Connectivity Predicts Gene Targets Underlying High Ionic-Liquid Tolerance in Yarrowia lipolytica
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Moderate High Temperature is Beneficial or Detrimental Depending on Carbon Availability in the Green Alga Chlamydomonas reinhardtii
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Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies … Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and … tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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