Results

Increased signal-to-noise ratios within experimental field trials by regressing spatially distributed soil properties as principal components
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Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their … estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene … CRAGE allows for the transplanting of these BGCs from one organism into an alternate host via a landing pad … to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene clusters. One of those was a …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … and evolutionary drivers of virus-host dynamics in soil microbial communities. … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s response to drought, from a large-scale field experiment to uncover the …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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