Results

Rapid whole-genome mutational profiling using next-generation sequencing technologies
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Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory … J, Abraham-Juarez MJ, Wang Z, Visel A (2013). De novo transcriptome assembly of drought tolerant CAM plants, Agave …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… water mold, genetically related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop …
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Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone
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