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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two supercomputers — Summit and Frontier — that process …
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How Microbes Can Protect Plants in Drier Straits
… looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the …
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JGI@25: Solving the Mystery of the Missing Oil
… of light crude oil spilling into the Gulf of Mexico, researchers at Lawrence Berkeley National Laboratory … the thousands of bacterial and archaeal species using a DNA-based array developed at Berkeley Lab. Over the next … cell genomics expertise led to the identification of a new “oil-seeking” species related to Oceanospirillales , …
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Year in Review: JGI’s 2018 Progress Report Available Now
… by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… today. I didn’t know anything about Principal Component Analysis (PCAs) when I first started, and overall found … interests post-Ph.D. in the sciences. “ Ul-Hasan was one of two UC Merced graduate students who participated in the … JGI as part of an education program developed between the two institutions to help train the next generation …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… group at Oak Ridge National Laboratory, he has started a new position as the Senior Manager, Machine Learning at … values which are integral to what I do on a daily basis. Two of the most relevant are service and respect, and I live …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… Science Program Annual Call. These projects include cutting-edge research into microbial communities — from … never served as a principal investigator. The other seven researchers are returning, including one previous New Investigator awardee.  The CSP Annual call is focused on …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
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Deciphering the molecular components of the quorum sensing system in the fungus Ophiostoma piceae
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Axel Visel
… novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral …
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