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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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David Goodstein
… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in … in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant Gene Atlas: an updateable …
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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Effects of sample treatments on genome recovery via single-cell genomics
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Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein …
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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals … thousand Actinobacteria strains and then use computational tools to analyze biosynthetic gene clusters and then develop …
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Tracking the Origins of Methane-Producing Microbes
… cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform …
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The protist Aurantiochytrium has universal subtelomeric rDNAs and is a host for mirusviruses
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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The Capsella rubella genome and the genomic consequences of rapid mating system evolution
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