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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure …
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Rex Malmstrom
… also carries out custom preparative work for difficult user projects, including those that require fluorescence … approaches. … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( … in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Thomas Mock, a marine microbiologist at the University of East Anglia, leads this effort to understand … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … and the code owners will be able to get assistance from mentors and a team to port their code to a new … … Oakridge National Laboratory Hackathon … From our partners …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the … photos of the interns. For this second year of the DOE JGI/University of California, Merced Genomics Distinguished … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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Daniel Udwary
… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … joining the JGI, he spent time as a faculty member at the University of Rhode Island, as a Senior Scientist at Warp … of secondary metabolism. … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University …
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A Powerful Technique to Study Microbes, Now Easier
Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that …
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel … Biotechnology Training Program (NIH 5 T32 GM008349) at the University of Wisconsin – Madison. This work was also …
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JGI Welcomes New UEC Members
… affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the … three new UEC members. They are: Kathleen Greenham of the University of Minnesota, Matthias Hess of the University of California, Davis and Kristen DeAngelis of …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics … 2015 Served on the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley Lab in this UC-wide …
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