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The Escherichia coli MFS-type transporter genes yhjE, ydiM, and yfcJ are required to produce an active bo3 quinol oxidase
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Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy.
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Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants
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Construction of a medicinal leech transcriptome database and its application to the identification of leech homologs of neural and innate immune genes
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … off our conversation with a quick recap of how plants, in general, work. KAROLINA:  We all know plants take up water … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on four research … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP … and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions … Below find a list of the nine researchers accepted for 2024. Proposals are accepted year-round; the next deadline …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases … to a new appreciation for the extent of diversity. The phylogenetic and functional characterization of this novel …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … bacteria, archaea and fungi. We thought this kind of analysis would provide a framework for the evolution of this … This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified across different …
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