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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once … Biology. (Wayne Keefe/Berkeley Lab) For example, the JGI first used CRAGE to engineer domesticated bacterial strains …
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JGI on the 2021 Highly Cited Researchers List
… research team that combined field data with a reference switchgrass genome to associate climate …
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Cataloging the Microbes that Manage the Health of River Systems
… to standardize the process. They noted this may be the first publicly available, river-focused microbial resource … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the … to be done is reducing the production of CO2 — this is the first and foremost important thing we need to do.” The study …
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iPHoP: A Matchmaker for Phages and their Hosts
… helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program …
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Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
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Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Rex Malmstrom
… group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
RNA sequencing to understand gene expression: one of the first cross-kingdom spatially-resolved transcriptomics … survive in those environments,”  Karen Serrano said. She is first author of this paper and a graduate researcher at the …
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