Results

The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … from similar organisms, researchers have gained insights on why the dry rot ( Serpula lacrymans ) is so destructive in … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to … to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … of France’s Institut de Biologie. His team proposed to sequence  Chaetoceros microalgae, or diatoms. Through the …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to … the HGP, the JGI has sustained its commitment to uploading sequence data generated on behalf of its user community to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … list of putative genes from C. citriodora to known TPS gene sequences from Eucalyptus species and other plants. The …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We …
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