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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … plants can produce species-specific blends of terpenoids, naturally occurring organic chemicals with a wide range of …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond …
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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … next generation of STEM professionals. Students can apply for internships and work onsite with an experienced … while Oliver Benelli applied through the University of California's  CalTeach initiative. During their time at the …
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … are available. The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact Found on all continents, including …
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Mapping the Earth’s Hidden Fungal Kingdom
… in perspective, the genus Aspergillus has been evolving for 82 million years, making it nearly 30 times older than … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … that, “In the next few years, with advances in genomics and multi-omics, phenotyping and AI we should better understand …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … way of collecting them is through a method called Multiple Displacement Amplification, and most genomes that … [DE-AC02-05CH11231]. Dr. Charles Gawad has been supported for this work by a Chan Zuckerberg Biohub Investigator …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of faculty and researchers describe a workforce development program for higher education that develops … National Science Foundation Research Coordination Network for Undergraduate Biology Education (Award # 2418285) and …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … more than two copies, a condition known as polyploidy. The multiple copies arise from past genome duplication, which …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … by Jeremy Schmutz of the JGI and the HudsonAlpha Institute for Biotechnology; Phil McClean of North Dakota State …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … Nature Plants , was able to assess absolute time estimates for major colonization events. It was previously assumed, …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth …
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