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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
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Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9–1
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The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database
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A compendium of multi-omic sequence information from the Saanich Inlet water column
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
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Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone
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Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)
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