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iPHoP: A Matchmaker for Phages and their Hosts
… of  microbes govern ecosystems. These organisms carry out important environmental processes like  carbon fixation … took on: generating virus-host predictions via multiple routes, then considering different suggested matches. The … iPHoP program creates a way of evaluating these different routes. To train the model, the team used 1,870 known …
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Novel bacterial clade reveals origin of form I Rubisco
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, … proposals for state-of-the-art functional genomics research from scientists who translate genomic information into … advancing the bioeconomy. This year's project goals range from engineering drought-tolerant woody bioenergy crops …
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Expanding Virophage Diversity
… maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome … classified into 27 distinct clades (17 of them without previously known representatives). Of these, 89 contigs … has extended the possible virophage genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, …
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JGI announces 2024 Functional Genomics awardees
… proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into … advancing the bioeconomy.  This year’s project goals range from improving crop productivity for bioenergy through …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… in science and research, two undergraduate students from UC Merced recently had summer internships in Walnut … and Bryan were among 5 UC Merced CAMP students who earned outstanding research awards. From the 99 students who attended, representing 9 UC …
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, …   Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … applications across critical sectors, including biological routes for critical minerals recovery, microbial pathways for …
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JGIota: Looking Back at Methane-Making Microbes
… gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down … still producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand …
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Alabama A&M Interns Access An Abundance of Knowledge
… fellow interns and scientists alike. Want to learn more about their experience? Watch the short video below. Video … working on creating transgenic plants with CRISPR Cas9 knockout mutants to observe and investigate how transporter … through climate change. Ti’Yanna Watson: The best part about interning here is the community aspect. Everyone here …
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A Shrubbier Version of Rubber
… Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great …
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Tracking the Origins of Methane-Producing Microbes
… user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) … team noticed some of the genomes diverged evolutionarily from other previously discovered genomes. When they analyzed …
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