Search

In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … Program Defining the vast landscape of gene regulatory sequences in the human genome. Understanding how variation in regulatory sequences influences human disease/biology. Assessing and …

… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … of metagenome-assembled genomes (MAGs) directly from sequenced environmental samples without needing to cultivate …

Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range …

The Sequence to Function: Applications and Analysis for the … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said Igor …

Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director … and animals by combining computational genome analysis, sequence-based genetic methods, and comparative … Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council 2009 …

… biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …

… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data …

… periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA …

… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the …

… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they published the sequences of these three chromosomes. These sequences …

… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …