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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, … of horizontal gene transfer. … The SMC provides complete sequence and annotation data for secondary metabolite …
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Complete Genome Sequence of Nitrosomonas cryotolerans ATCC 49181, a Phylogenetically Distinct Ammonia-Oxidizing Bacterium Isolated from Arctic Waters
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to … You don’t have tunnel vision anymore, only seeing the microbes you can grow in the lab — suddenly you see …
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A compendium of geochemical information from the Saanich Inlet water column
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Marine microbial community responses related to wetland carbon mobilization in the coastal zone
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Niche dimensions of a marine bacterium are identified using invasion studies in coastal seawater
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Niche differentiation among annually recurrent coastal Marine Group II Euryarchaeota
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Microbial Ecology and Site Characteristics Underlie Differences in Salinity‐Methane Relationships in Coastal Wetlands
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As … elements like viruses spread their DNA, they can affect how microbes cycle nutrients and adapt to climate change. …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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Prokaryotic responses to a warm temperature anomaly in northeast subarctic Pacific waters
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