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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … characterizing the role endosymbiotic bacteria play on mating habits of Mucoromycota fungi, and their effects on …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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CSP Large Scale Call
… and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … While applications will be accepted that address any aspect of these mission areas, priority will be given to projects that address the areas of special emphasis that are listed in the call and leverage …
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The Capsella rubella genome and the genomic consequences of rapid mating system evolution
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence similarity …
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … of the University of California, Berkeley studies the alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Genetics of mating in members of the Chaetomiaceae as revealed by experimental and genomic characterization of reproduction in Myceliophthora heterothallica
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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota)
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